<!--{{{-->
<link rel='alternate' type='application/rss+xml' title='RSS' href='index.xml'/>
<!--}}}-->
Background: #fff
Foreground: #000
PrimaryPale: #8cf
PrimaryLight: #18f
PrimaryMid: #04b
PrimaryDark: #014
SecondaryPale: #ffc
SecondaryLight: #fe8
SecondaryMid: #db4
SecondaryDark: #841
TertiaryPale: #eee
TertiaryLight: #ccc
TertiaryMid: #999
TertiaryDark: #666
Error: #f88
/*{{{*/
body {background:[[ColorPalette::Background]]; color:[[ColorPalette::Foreground]];}

a {color:[[ColorPalette::PrimaryMid]];}
a:hover {background-color:[[ColorPalette::PrimaryMid]]; color:[[ColorPalette::Background]];}
a img {border:0;}

h1,h2,h3,h4,h5,h6 {color:[[ColorPalette::SecondaryDark]]; background:transparent;}
h1 {border-bottom:2px solid [[ColorPalette::TertiaryLight]];}
h2,h3 {border-bottom:1px solid [[ColorPalette::TertiaryLight]];}

.button {color:[[ColorPalette::PrimaryDark]]; border:1px solid [[ColorPalette::Background]];}
.button:hover {color:[[ColorPalette::PrimaryDark]]; background:[[ColorPalette::SecondaryLight]]; border-color:[[ColorPalette::SecondaryMid]];}
.button:active {color:[[ColorPalette::Background]]; background:[[ColorPalette::SecondaryMid]]; border:1px solid [[ColorPalette::SecondaryDark]];}

.header {background:[[ColorPalette::PrimaryMid]];}
.headerShadow {color:[[ColorPalette::Foreground]];}
.headerShadow a {font-weight:normal; color:[[ColorPalette::Foreground]];}
.headerForeground {color:[[ColorPalette::Background]];}
.headerForeground a {font-weight:normal; color:[[ColorPalette::PrimaryPale]];}

.tabSelected{color:[[ColorPalette::PrimaryDark]];
	background:[[ColorPalette::TertiaryPale]];
	border-left:1px solid [[ColorPalette::TertiaryLight]];
	border-top:1px solid [[ColorPalette::TertiaryLight]];
	border-right:1px solid [[ColorPalette::TertiaryLight]];
}
.tabUnselected {color:[[ColorPalette::Background]]; background:[[ColorPalette::TertiaryMid]];}
.tabContents {color:[[ColorPalette::PrimaryDark]]; background:[[ColorPalette::TertiaryPale]]; border:1px solid [[ColorPalette::TertiaryLight]];}
.tabContents .button {border:0;}

#sidebar {}
#sidebarOptions input {border:1px solid [[ColorPalette::PrimaryMid]];}
#sidebarOptions .sliderPanel {background:[[ColorPalette::PrimaryPale]];}
#sidebarOptions .sliderPanel a {border:none;color:[[ColorPalette::PrimaryMid]];}
#sidebarOptions .sliderPanel a:hover {color:[[ColorPalette::Background]]; background:[[ColorPalette::PrimaryMid]];}
#sidebarOptions .sliderPanel a:active {color:[[ColorPalette::PrimaryMid]]; background:[[ColorPalette::Background]];}

.wizard {background:[[ColorPalette::PrimaryPale]]; border:1px solid [[ColorPalette::PrimaryMid]];}
.wizard h1 {color:[[ColorPalette::PrimaryDark]]; border:none;}
.wizard h2 {color:[[ColorPalette::Foreground]]; border:none;}
.wizardStep {background:[[ColorPalette::Background]]; color:[[ColorPalette::Foreground]];
	border:1px solid [[ColorPalette::PrimaryMid]];}
.wizardStep.wizardStepDone {background:[[ColorPalette::TertiaryLight]];}
.wizardFooter {background:[[ColorPalette::PrimaryPale]];}
.wizardFooter .status {background:[[ColorPalette::PrimaryDark]]; color:[[ColorPalette::Background]];}
.wizard .button {color:[[ColorPalette::Foreground]]; background:[[ColorPalette::SecondaryLight]]; border: 1px solid;
	border-color:[[ColorPalette::SecondaryPale]] [[ColorPalette::SecondaryDark]] [[ColorPalette::SecondaryDark]] [[ColorPalette::SecondaryPale]];}
.wizard .button:hover {color:[[ColorPalette::Foreground]]; background:[[ColorPalette::Background]];}
.wizard .button:active {color:[[ColorPalette::Background]]; background:[[ColorPalette::Foreground]]; border: 1px solid;
	border-color:[[ColorPalette::PrimaryDark]] [[ColorPalette::PrimaryPale]] [[ColorPalette::PrimaryPale]] [[ColorPalette::PrimaryDark]];}

#messageArea {border:1px solid [[ColorPalette::SecondaryMid]]; background:[[ColorPalette::SecondaryLight]]; color:[[ColorPalette::Foreground]];}
#messageArea .button {color:[[ColorPalette::PrimaryMid]]; background:[[ColorPalette::SecondaryPale]]; border:none;}

.popupTiddler {background:[[ColorPalette::TertiaryPale]]; border:2px solid [[ColorPalette::TertiaryMid]];}

.popup {background:[[ColorPalette::TertiaryPale]]; color:[[ColorPalette::TertiaryDark]]; border-left:1px solid [[ColorPalette::TertiaryMid]]; border-top:1px solid [[ColorPalette::TertiaryMid]]; border-right:2px solid [[ColorPalette::TertiaryDark]]; border-bottom:2px solid [[ColorPalette::TertiaryDark]];}
.popup hr {color:[[ColorPalette::PrimaryDark]]; background:[[ColorPalette::PrimaryDark]]; border-bottom:1px;}
.popup li.disabled {color:[[ColorPalette::TertiaryMid]];}
.popup li a, .popup li a:visited {color:[[ColorPalette::Foreground]]; border: none;}
.popup li a:hover {background:[[ColorPalette::SecondaryLight]]; color:[[ColorPalette::Foreground]]; border: none;}
.popup li a:active {background:[[ColorPalette::SecondaryPale]]; color:[[ColorPalette::Foreground]]; border: none;}
.popupHighlight {background:[[ColorPalette::Background]]; color:[[ColorPalette::Foreground]];}
.listBreak div {border-bottom:1px solid [[ColorPalette::TertiaryDark]];}

.tiddler .defaultCommand {font-weight:bold;}

.shadow .title {color:[[ColorPalette::TertiaryDark]];}

.title {color:[[ColorPalette::SecondaryDark]];}
.subtitle {color:[[ColorPalette::TertiaryDark]];}

.toolbar {color:[[ColorPalette::PrimaryMid]];}
.toolbar a {color:[[ColorPalette::TertiaryLight]];}
.selected .toolbar a {color:[[ColorPalette::TertiaryMid]];}
.selected .toolbar a:hover {color:[[ColorPalette::Foreground]];}

.tagging, .tagged {border:1px solid [[ColorPalette::TertiaryPale]]; background-color:[[ColorPalette::TertiaryPale]];}
.selected .tagging, .selected .tagged {background-color:[[ColorPalette::TertiaryLight]]; border:1px solid [[ColorPalette::TertiaryMid]];}
.tagging .listTitle, .tagged .listTitle {color:[[ColorPalette::PrimaryDark]];}
.tagging .button, .tagged .button {border:none;}

.footer {color:[[ColorPalette::TertiaryLight]];}
.selected .footer {color:[[ColorPalette::TertiaryMid]];}

.sparkline {background:[[ColorPalette::PrimaryPale]]; border:0;}
.sparktick {background:[[ColorPalette::PrimaryDark]];}

.error, .errorButton {color:[[ColorPalette::Foreground]]; background:[[ColorPalette::Error]];}
.warning {color:[[ColorPalette::Foreground]]; background:[[ColorPalette::SecondaryPale]];}
.lowlight {background:[[ColorPalette::TertiaryLight]];}

.zoomer {background:none; color:[[ColorPalette::TertiaryMid]]; border:3px solid [[ColorPalette::TertiaryMid]];}

.imageLink, #displayArea .imageLink {background:transparent;}

.annotation {background:[[ColorPalette::SecondaryLight]]; color:[[ColorPalette::Foreground]]; border:2px solid [[ColorPalette::SecondaryMid]];}

.viewer .listTitle {list-style-type:none; margin-left:-2em;}
.viewer .button {border:1px solid [[ColorPalette::SecondaryMid]];}
.viewer blockquote {border-left:3px solid [[ColorPalette::TertiaryDark]];}

.viewer table, table.twtable {border:2px solid [[ColorPalette::TertiaryDark]];}
.viewer th, .viewer thead td, .twtable th, .twtable thead td {background:[[ColorPalette::SecondaryMid]]; border:1px solid [[ColorPalette::TertiaryDark]]; color:[[ColorPalette::Background]];}
.viewer td, .viewer tr, .twtable td, .twtable tr {border:1px solid [[ColorPalette::TertiaryDark]];}

.viewer pre {border:1px solid [[ColorPalette::SecondaryLight]]; background:[[ColorPalette::SecondaryPale]];}
.viewer code {color:[[ColorPalette::SecondaryDark]];}
.viewer hr {border:0; border-top:dashed 1px [[ColorPalette::TertiaryDark]]; color:[[ColorPalette::TertiaryDark]];}

.highlight, .marked {background:[[ColorPalette::SecondaryLight]];}

.editor input {border:1px solid [[ColorPalette::PrimaryMid]];}
.editor textarea {border:1px solid [[ColorPalette::PrimaryMid]]; width:100%;}
.editorFooter {color:[[ColorPalette::TertiaryMid]];}

#backstageArea {background:[[ColorPalette::Foreground]]; color:[[ColorPalette::TertiaryMid]];}
#backstageArea a {background:[[ColorPalette::Foreground]]; color:[[ColorPalette::Background]]; border:none;}
#backstageArea a:hover {background:[[ColorPalette::SecondaryLight]]; color:[[ColorPalette::Foreground]]; }
#backstageArea a.backstageSelTab {background:[[ColorPalette::Background]]; color:[[ColorPalette::Foreground]];}
#backstageButton a {background:none; color:[[ColorPalette::Background]]; border:none;}
#backstageButton a:hover {background:[[ColorPalette::Foreground]]; color:[[ColorPalette::Background]]; border:none;}
#backstagePanel {background:[[ColorPalette::Background]]; border-color: [[ColorPalette::Background]] [[ColorPalette::TertiaryDark]] [[ColorPalette::TertiaryDark]] [[ColorPalette::TertiaryDark]];}
.backstagePanelFooter .button {border:none; color:[[ColorPalette::Background]];}
.backstagePanelFooter .button:hover {color:[[ColorPalette::Foreground]];}
#backstageCloak {background:[[ColorPalette::Foreground]]; opacity:0.6; filter:'alpha(opacity:60)';}
/*}}}*/
/*{{{*/
* html .tiddler {height:1%;}

body {font-size:.75em; font-family:arial,helvetica; margin:0; padding:0;}

h1,h2,h3,h4,h5,h6 {font-weight:bold; text-decoration:none;}
h1,h2,h3 {padding-bottom:1px; margin-top:1.2em;margin-bottom:0.3em;}
h4,h5,h6 {margin-top:1em;}
h1 {font-size:1.35em;}
h2 {font-size:1.25em;}
h3 {font-size:1.1em;}
h4 {font-size:1em;}
h5 {font-size:.9em;}

hr {height:1px;}

a {text-decoration:none;}

dt {font-weight:bold;}

ol {list-style-type:decimal;}
ol ol {list-style-type:lower-alpha;}
ol ol ol {list-style-type:lower-roman;}
ol ol ol ol {list-style-type:decimal;}
ol ol ol ol ol {list-style-type:lower-alpha;}
ol ol ol ol ol ol {list-style-type:lower-roman;}
ol ol ol ol ol ol ol {list-style-type:decimal;}

.txtOptionInput {width:11em;}

#contentWrapper .chkOptionInput {border:0;}

.externalLink {text-decoration:underline;}

.indent {margin-left:3em;}
.outdent {margin-left:3em; text-indent:-3em;}
code.escaped {white-space:nowrap;}

.tiddlyLinkExisting {font-weight:bold;}
.tiddlyLinkNonExisting {font-style:italic;}

/* the 'a' is required for IE, otherwise it renders the whole tiddler in bold */
a.tiddlyLinkNonExisting.shadow {font-weight:bold;}

#mainMenu .tiddlyLinkExisting,
	#mainMenu .tiddlyLinkNonExisting,
	#sidebarTabs .tiddlyLinkNonExisting {font-weight:normal; font-style:normal;}
#sidebarTabs .tiddlyLinkExisting {font-weight:bold; font-style:normal;}

.header {position:relative;}
.header a:hover {background:transparent;}
.headerShadow {position:relative; padding:4.5em 0em 1em 1em; left:-1px; top:-1px;}
.headerForeground {position:absolute; padding:4.5em 0em 1em 1em; left:0px; top:0px;}

.siteTitle {font-size:3em;}
.siteSubtitle {font-size:1.2em;}

#mainMenu {position:absolute; left:0; width:10em; text-align:right; line-height:1.6em; padding:1.5em 0.5em 0.5em 0.5em; font-size:1.1em;}

#sidebar {position:absolute; right:3px; width:16em; font-size:.9em;}
#sidebarOptions {padding-top:0.3em;}
#sidebarOptions a {margin:0em 0.2em; padding:0.2em 0.3em; display:block;}
#sidebarOptions input {margin:0.4em 0.5em;}
#sidebarOptions .sliderPanel {margin-left:1em; padding:0.5em; font-size:.85em;}
#sidebarOptions .sliderPanel a {font-weight:bold; display:inline; padding:0;}
#sidebarOptions .sliderPanel input {margin:0 0 .3em 0;}
#sidebarTabs .tabContents {width:15em; overflow:hidden;}

.wizard {padding:0.1em 1em 0em 2em;}
.wizard h1 {font-size:2em; font-weight:bold; background:none; padding:0em 0em 0em 0em; margin:0.4em 0em 0.2em 0em;}
.wizard h2 {font-size:1.2em; font-weight:bold; background:none; padding:0em 0em 0em 0em; margin:0.4em 0em 0.2em 0em;}
.wizardStep {padding:1em 1em 1em 1em;}
.wizard .button {margin:0.5em 0em 0em 0em; font-size:1.2em;}
.wizardFooter {padding:0.8em 0.4em 0.8em 0em;}
.wizardFooter .status {padding:0em 0.4em 0em 0.4em; margin-left:1em;}
.wizard .button {padding:0.1em 0.2em 0.1em 0.2em;}

#messageArea {position:fixed; top:2em; right:0em; margin:0.5em; padding:0.5em; z-index:2000; _position:absolute;}
.messageToolbar {display:block; text-align:right; padding:0.2em 0.2em 0.2em 0.2em;}
#messageArea a {text-decoration:underline;}

.tiddlerPopupButton {padding:0.2em 0.2em 0.2em 0.2em;}
.popupTiddler {position: absolute; z-index:300; padding:1em 1em 1em 1em; margin:0;}

.popup {position:absolute; z-index:300; font-size:.9em; padding:0; list-style:none; margin:0;}
.popup .popupMessage {padding:0.4em;}
.popup hr {display:block; height:1px; width:auto; padding:0; margin:0.2em 0em;}
.popup li.disabled {padding:0.4em;}
.popup li a {display:block; padding:0.4em; font-weight:normal; cursor:pointer;}
.listBreak {font-size:1px; line-height:1px;}
.listBreak div {margin:2px 0;}

.tabset {padding:1em 0em 0em 0.5em;}
.tab {margin:0em 0em 0em 0.25em; padding:2px;}
.tabContents {padding:0.5em;}
.tabContents ul, .tabContents ol {margin:0; padding:0;}
.txtMainTab .tabContents li {list-style:none;}
.tabContents li.listLink { margin-left:.75em;}

#contentWrapper {display:block;}
#splashScreen {display:none;}

#displayArea {margin:1em 17em 0em 14em;}

.toolbar {text-align:right; font-size:.9em;}

.tiddler {padding:1em 1em 0em 1em;}

.missing .viewer,.missing .title {font-style:italic;}

.title {font-size:1.6em; font-weight:bold;}

.missing .subtitle {display:none;}
.subtitle {font-size:1.1em;}

.tiddler .button {padding:0.2em 0.4em;}

.tagging {margin:0.5em 0.5em 0.5em 0; float:left; display:none;}
.isTag .tagging {display:block;}
.tagged {margin:0.5em; float:right;}
.tagging, .tagged {font-size:0.9em; padding:0.25em;}
.tagging ul, .tagged ul {list-style:none; margin:0.25em; padding:0;}
.tagClear {clear:both;}

.footer {font-size:.9em;}
.footer li {display:inline;}

.annotation {padding:0.5em; margin:0.5em;}

* html .viewer pre {width:99%; padding:0 0 1em 0;}
.viewer {line-height:1.4em; padding-top:0.5em;}
.viewer .button {margin:0em 0.25em; padding:0em 0.25em;}
.viewer blockquote {line-height:1.5em; padding-left:0.8em;margin-left:2.5em;}
.viewer ul, .viewer ol {margin-left:0.5em; padding-left:1.5em;}

.viewer table, table.twtable {border-collapse:collapse; margin:0.8em 1.0em;}
.viewer th, .viewer td, .viewer tr,.viewer caption,.twtable th, .twtable td, .twtable tr,.twtable caption {padding:3px;}
table.listView {font-size:0.85em; margin:0.8em 1.0em;}
table.listView th, table.listView td, table.listView tr {padding:0px 3px 0px 3px;}

.viewer pre {padding:0.5em; margin-left:0.5em; font-size:1.2em; line-height:1.4em; overflow:auto;}
.viewer code {font-size:1.2em; line-height:1.4em;}

.editor {font-size:1.1em;}
.editor input, .editor textarea {display:block; width:100%; font:inherit;}
.editorFooter {padding:0.25em 0em; font-size:.9em;}
.editorFooter .button {padding-top:0px; padding-bottom:0px;}

.fieldsetFix {border:0; padding:0; margin:1px 0px 1px 0px;}

.sparkline {line-height:1em;}
.sparktick {outline:0;}

.zoomer {font-size:1.1em; position:absolute; overflow:hidden;}
.zoomer div {padding:1em;}

* html #backstage {width:99%;}
* html #backstageArea {width:99%;}
#backstageArea {display:none; position:relative; overflow: hidden; z-index:150; padding:0.3em 0.5em 0.3em 0.5em;}
#backstageToolbar {position:relative;}
#backstageArea a {font-weight:bold; margin-left:0.5em; padding:0.3em 0.5em 0.3em 0.5em;}
#backstageButton {display:none; position:absolute; z-index:175; top:0em; right:0em;}
#backstageButton a {padding:0.1em 0.4em 0.1em 0.4em; margin:0.1em 0.1em 0.1em 0.1em;}
#backstage {position:relative; width:100%; z-index:50;}
#backstagePanel {display:none; z-index:100; position:absolute; margin:0em 3em 0em 3em; padding:1em 1em 1em 1em;}
.backstagePanelFooter {padding-top:0.2em; float:right;}
.backstagePanelFooter a {padding:0.2em 0.4em 0.2em 0.4em;}
#backstageCloak {display:none; z-index:20; position:absolute; width:100%; height:100px;}

.whenBackstage {display:none;}
.backstageVisible .whenBackstage {display:block;}
/*}}}*/
/***
StyleSheet for use when a translation requires any css style changes.
This StyleSheet can be used directly by languages such as Chinese, Japanese and Korean which need larger font sizes.
***/
/*{{{*/
body {font-size:0.8em;}
#sidebarOptions {font-size:1.05em;}
#sidebarOptions a {font-style:normal;}
#sidebarOptions .sliderPanel {font-size:0.95em;}
.subtitle {font-size:0.8em;}
.viewer table.listView {font-size:0.95em;}
/*}}}*/
/*{{{*/
@media print {
#mainMenu, #sidebar, #messageArea, .toolbar, #backstageButton, #backstageArea {display: none ! important;}
#displayArea {margin: 1em 1em 0em 1em;}
/* Fixes a feature in Firefox 1.5.0.2 where print preview displays the noscript content */
noscript {display:none;}
}
/*}}}*/
<!--{{{-->
<div class='header' macro='gradient vert [[ColorPalette::PrimaryLight]] [[ColorPalette::PrimaryMid]]'>
<div class='headerShadow'>
<span class='siteTitle' refresh='content' tiddler='SiteTitle'></span>&nbsp;
<span class='siteSubtitle' refresh='content' tiddler='SiteSubtitle'></span>
</div>
<div class='headerForeground'>
<span class='siteTitle' refresh='content' tiddler='SiteTitle'></span>&nbsp;
<span class='siteSubtitle' refresh='content' tiddler='SiteSubtitle'></span>
</div>
</div>
<div id='mainMenu' refresh='content' tiddler='MainMenu'></div>
<div id='sidebar'>
<div id='sidebarOptions' refresh='content' tiddler='SideBarOptions'></div>
<div id='sidebarTabs' refresh='content' force='true' tiddler='SideBarTabs'></div>
</div>
<div id='displayArea'>
<div id='messageArea'></div>
<div id='tiddlerDisplay'></div>
</div>
<!--}}}-->
<!--{{{-->
<div class='toolbar' macro='toolbar closeTiddler closeOthers +editTiddler > fields syncing permalink references jump'></div>
<div class='title' macro='view title'></div>
<div class='subtitle'><span macro='view modifier link'></span>, <span macro='view modified date'></span> (<span macro='message views.wikified.createdPrompt'></span> <span macro='view created date'></span>)</div>
<div class='tagging' macro='tagging'></div>
<div class='tagged' macro='tags'></div>
<div class='viewer' macro='view text wikified'></div>
<div class='tagClear'></div>
<!--}}}-->
<!--{{{-->
<div class='toolbar' macro='toolbar +saveTiddler -cancelTiddler deleteTiddler'></div>
<div class='title' macro='view title'></div>
<div class='editor' macro='edit title'></div>
<div macro='annotations'></div>
<div class='editor' macro='edit text'></div>
<div class='editor' macro='edit tags'></div><div class='editorFooter'><span macro='message views.editor.tagPrompt'></span><span macro='tagChooser'></span></div>
<!--}}}-->
To get started with this blank TiddlyWiki, you'll need to modify the following tiddlers:
* SiteTitle & SiteSubtitle: The title and subtitle of the site, as shown above (after saving, they will also appear in the browser title bar)
* MainMenu: The menu (usually on the left)
* DefaultTiddlers: Contains the names of the tiddlers that you want to appear when the TiddlyWiki is opened
You'll also need to enter your username for signing your edits: <<option txtUserName>>
These InterfaceOptions for customising TiddlyWiki are saved in your browser

Your username for signing your edits. Write it as a WikiWord (eg JoeBloggs)

<<option txtUserName>>
<<option chkSaveBackups>> SaveBackups
<<option chkAutoSave>> AutoSave
<<option chkRegExpSearch>> RegExpSearch
<<option chkCaseSensitiveSearch>> CaseSensitiveSearch
<<option chkAnimate>> EnableAnimations

----
Also see AdvancedOptions
<<importTiddlers>>
 [<img[Aleph|aleph_logo.png]]
Aleph is both a multi-platform machine learning framework aimed at simplicity and performance, and a library of selected state-of-the-art algorithms.

Aleph features:
* semi-supervised algorithms: graph label propagation, discrete regularization, etc.
* large-scale linear algorithms: logistic linear regression, stochastic gradient descent linear SVM, etc.
* wrappers to well-known tools: [[libsvm|http://www.csie.ntu.edu.tw/~cjlin/libsvm/]], [[SVMlight|http://svmlight.joachims.org/]], etc.
* graph-based algorithms: random walks, absorbing random walks, etc.
* feature selection statistics: infogain, cross entropy, chi-squared, etc.
* convenience validation utilities: several splitting methods, several scoring functions
* fast vector and matrix implementations: based on [[matrix toolkits for java|http://ressim.berlios.de/]], but with a few optimizations on top of it
* fast on-the-fly operations over datasets, instances and features: based on the concept of views over those first-class objects in the framework

Most importantly, the framework features a ''clean design'' and is therefore easily ''extensible''.


[>img[SourceForge.net Logo|http://sflogo.sourceforge.net/sflogo.php?group_id=207475&amp;type=2][http://sourceforge.net]]

For more information check the [[Sourceforge project page|http://sourceforge.net/projects/aleph-ml]].


[img[X-Media project|x-media.jpg][http://www.x-media-project.org/]]
Aleph was (partly) funded by the [[X-Media project|http://www.x-media-project.org/]], sponsored by the European Commission as part of the Information Society Technologies (IST) programme under EC grant number IST-FP6-026978.
/***
|''Name:''|CryptoFunctionsPlugin|
|''Description:''|Support for cryptographic functions|
***/
//{{{
if(!version.extensions.CryptoFunctionsPlugin) {
version.extensions.CryptoFunctionsPlugin = {installed:true};

//--
//-- Crypto functions and associated conversion routines
//--

// Crypto "namespace"
function Crypto() {}

// Convert a string to an array of big-endian 32-bit words
Crypto.strToBe32s = function(str)
{
	var be = Array();
	var len = Math.floor(str.length/4);
	var i, j;
	for(i=0, j=0; i<len; i++, j+=4) {
		be[i] = ((str.charCodeAt(j)&0xff) << 24)|((str.charCodeAt(j+1)&0xff) << 16)|((str.charCodeAt(j+2)&0xff) << 8)|(str.charCodeAt(j+3)&0xff);
	}
	while (j<str.length) {
		be[j>>2] |= (str.charCodeAt(j)&0xff)<<(24-(j*8)%32);
		j++;
	}
	return be;
};

// Convert an array of big-endian 32-bit words to a string
Crypto.be32sToStr = function(be)
{
	var str = "";
	for(var i=0;i<be.length*32;i+=8)
		str += String.fromCharCode((be[i>>5]>>>(24-i%32)) & 0xff);
	return str;
};

// Convert an array of big-endian 32-bit words to a hex string
Crypto.be32sToHex = function(be)
{
	var hex = "0123456789ABCDEF";
	var str = "";
	for(var i=0;i<be.length*4;i++)
		str += hex.charAt((be[i>>2]>>((3-i%4)*8+4))&0xF) + hex.charAt((be[i>>2]>>((3-i%4)*8))&0xF);
	return str;
};

// Return, in hex, the SHA-1 hash of a string
Crypto.hexSha1Str = function(str)
{
	return Crypto.be32sToHex(Crypto.sha1Str(str));
};

// Return the SHA-1 hash of a string
Crypto.sha1Str = function(str)
{
	return Crypto.sha1(Crypto.strToBe32s(str),str.length);
};

// Calculate the SHA-1 hash of an array of blen bytes of big-endian 32-bit words
Crypto.sha1 = function(x,blen)
{
	// Add 32-bit integers, wrapping at 32 bits
	add32 = function(a,b)
	{
		var lsw = (a&0xFFFF)+(b&0xFFFF);
		var msw = (a>>16)+(b>>16)+(lsw>>16);
		return (msw<<16)|(lsw&0xFFFF);
	};
	// Add five 32-bit integers, wrapping at 32 bits
	add32x5 = function(a,b,c,d,e)
	{
		var lsw = (a&0xFFFF)+(b&0xFFFF)+(c&0xFFFF)+(d&0xFFFF)+(e&0xFFFF);
		var msw = (a>>16)+(b>>16)+(c>>16)+(d>>16)+(e>>16)+(lsw>>16);
		return (msw<<16)|(lsw&0xFFFF);
	};
	// Bitwise rotate left a 32-bit integer by 1 bit
	rol32 = function(n)
	{
		return (n>>>31)|(n<<1);
	};

	var len = blen*8;
	// Append padding so length in bits is 448 mod 512
	x[len>>5] |= 0x80 << (24-len%32);
	// Append length
	x[((len+64>>9)<<4)+15] = len;
	var w = Array(80);

	var k1 = 0x5A827999;
	var k2 = 0x6ED9EBA1;
	var k3 = 0x8F1BBCDC;
	var k4 = 0xCA62C1D6;

	var h0 = 0x67452301;
	var h1 = 0xEFCDAB89;
	var h2 = 0x98BADCFE;
	var h3 = 0x10325476;
	var h4 = 0xC3D2E1F0;

	for(var i=0;i<x.length;i+=16) {
		var j,t;
		var a = h0;
		var b = h1;
		var c = h2;
		var d = h3;
		var e = h4;
		for(j = 0;j<16;j++) {
			w[j] = x[i+j];
			t = add32x5(e,(a>>>27)|(a<<5),d^(b&(c^d)),w[j],k1);
			e=d; d=c; c=(b>>>2)|(b<<30); b=a; a = t;
		}
		for(j=16;j<20;j++) {
			w[j] = rol32(w[j-3]^w[j-8]^w[j-14]^w[j-16]);
			t = add32x5(e,(a>>>27)|(a<<5),d^(b&(c^d)),w[j],k1);
			e=d; d=c; c=(b>>>2)|(b<<30); b=a; a = t;
		}
		for(j=20;j<40;j++) {
			w[j] = rol32(w[j-3]^w[j-8]^w[j-14]^w[j-16]);
			t = add32x5(e,(a>>>27)|(a<<5),b^c^d,w[j],k2);
			e=d; d=c; c=(b>>>2)|(b<<30); b=a; a = t;
		}
		for(j=40;j<60;j++) {
			w[j] = rol32(w[j-3]^w[j-8]^w[j-14]^w[j-16]);
			t = add32x5(e,(a>>>27)|(a<<5),(b&c)|(d&(b|c)),w[j],k3);
			e=d; d=c; c=(b>>>2)|(b<<30); b=a; a = t;
		}
		for(j=60;j<80;j++) {
			w[j] = rol32(w[j-3]^w[j-8]^w[j-14]^w[j-16]);
			t = add32x5(e,(a>>>27)|(a<<5),b^c^d,w[j],k4);
			e=d; d=c; c=(b>>>2)|(b<<30); b=a; a = t;
		}

		h0 = add32(h0,a);
		h1 = add32(h1,b);
		h2 = add32(h2,c);
		h3 = add32(h3,d);
		h4 = add32(h4,e);
	}
	return Array(h0,h1,h2,h3,h4);
};


}
//}}}
Aleph
/***
|''Name:''|DeprecatedFunctionsPlugin|
|''Description:''|Support for deprecated functions removed from core|
***/
//{{{
if(!version.extensions.DeprecatedFunctionsPlugin) {
version.extensions.DeprecatedFunctionsPlugin = {installed:true};

//--
//-- Deprecated code
//--

// @Deprecated: Use createElementAndWikify and this.termRegExp instead
config.formatterHelpers.charFormatHelper = function(w)
{
	w.subWikify(createTiddlyElement(w.output,this.element),this.terminator);
};

// @Deprecated: Use enclosedTextHelper and this.lookaheadRegExp instead
config.formatterHelpers.monospacedByLineHelper = function(w)
{
	var lookaheadRegExp = new RegExp(this.lookahead,"mg");
	lookaheadRegExp.lastIndex = w.matchStart;
	var lookaheadMatch = lookaheadRegExp.exec(w.source);
	if(lookaheadMatch && lookaheadMatch.index == w.matchStart) {
		var text = lookaheadMatch[1];
		if(config.browser.isIE)
			text = text.replace(/\n/g,"\r");
		createTiddlyElement(w.output,"pre",null,null,text);
		w.nextMatch = lookaheadRegExp.lastIndex;
	}
};

// @Deprecated: Use <br> or <br /> instead of <<br>>
config.macros.br = {};
config.macros.br.handler = function(place)
{
	createTiddlyElement(place,"br");
};

// Find an entry in an array. Returns the array index or null
// @Deprecated: Use indexOf instead
Array.prototype.find = function(item)
{
	var i = this.indexOf(item);
	return i == -1 ? null : i;
};

// Load a tiddler from an HTML DIV. The caller should make sure to later call Tiddler.changed()
// @Deprecated: Use store.getLoader().internalizeTiddler instead
Tiddler.prototype.loadFromDiv = function(divRef,title)
{
	return store.getLoader().internalizeTiddler(store,this,title,divRef);
};

// Format the text for storage in an HTML DIV
// @Deprecated Use store.getSaver().externalizeTiddler instead.
Tiddler.prototype.saveToDiv = function()
{
	return store.getSaver().externalizeTiddler(store,this);
};

// @Deprecated: Use store.allTiddlersAsHtml() instead
function allTiddlersAsHtml()
{
	return store.allTiddlersAsHtml();
}

// @Deprecated: Use refreshPageTemplate instead
function applyPageTemplate(title)
{
	refreshPageTemplate(title);
}

// @Deprecated: Use story.displayTiddlers instead
function displayTiddlers(srcElement,titles,template,unused1,unused2,animate,unused3)
{
	story.displayTiddlers(srcElement,titles,template,animate);
}

// @Deprecated: Use story.displayTiddler instead
function displayTiddler(srcElement,title,template,unused1,unused2,animate,unused3)
{
	story.displayTiddler(srcElement,title,template,animate);
}

// @Deprecated: Use functions on right hand side directly instead
var createTiddlerPopup = Popup.create;
var scrollToTiddlerPopup = Popup.show;
var hideTiddlerPopup = Popup.remove;

// @Deprecated: Use right hand side directly instead
var regexpBackSlashEn = new RegExp("\\\\n","mg");
var regexpBackSlash = new RegExp("\\\\","mg");
var regexpBackSlashEss = new RegExp("\\\\s","mg");
var regexpNewLine = new RegExp("\n","mg");
var regexpCarriageReturn = new RegExp("\r","mg");

}
//}}}
Aleph 0.6 is the latest version. Get it from [[sourceforge|https://sourceforge.net/project/showfiles.php?group_id=219932]].
Coming soon.
The following exemplifies how to setup a simple multi-label classification task in Aleph. The principle is the same for more complex tasks.

Suppose we want to classify a set of multi-token strings and are given training data in the form of a map that given the string returns its labels:
<html>
<pre>
<font size=-1>
Set&lt;String&gt; strings = new HashSet&lt;String&gt;();
Map&lt;String, ArrayList&gt; trainingData = new HashMap&lt;String, ArrayList&gt;();
// some code to fill in the above data structures
</font>
</pre>
</html>
In Aleph, we create a dataset definition and then pass it to the learning algorithm to get a classifier. Suppose we adopt a one vs all approach and create a binary classification task, one for each class. The easiest way to define a dataset is to declare it inline, as follows:
<html>
<pre>
<font size=-1>
String aClass = "some class";
ObjectIndex&lt;String&gt; index = new ObjectIndex(),  findex = new ObjectIndex();

Dataset dataset = new Dataset() {

    public String label() {
        return "dataset for " + aClass;
    }

    public int size() {
        return strings.size();
    }

    public Iterator<Instance> iterator() {

        return new Iterator<Instance>() {

            private Iterator<String> it = strings.iterator();

            public boolean hasNext() {
                return it.hasNext();
            }

            public Instance next() {
                final String s = it.next();

                return new InstanceAbstract() {

                    public int getObjectId() throws AlephException {
                        return index.add(s);
                    }

                    public double getTarget() throws AlephException {
                        boolean positive = trainingData.get(aClass).contains(s);
                        return positive ? 1.0 : -1.0; 
                    }

                    public Vector getFeatures() throws AlephException {
                        Vector v = new SparseVector();
                        StringTokenizer tokenizer = new StringTokenizer(s);
                        while (tokenizer.hasMoreTokens()) 
                            v.add(findex.add(tokenizer.nextToken()), 1.0);                        
                        return v;
                    }
                };
            }

            public void remove() {
            }
        };
    }
};
</font>
</pre>
</html>
The dataset iterator iterates through the underlying set iterator, returning dataset instances, which are also declared inline. A dataset instance is composed of an integer id, a target and a set of features. The id is obtained by indexing the string itself. The target is obtained by consulting the trainingData. The features are obtaining by tokenizing the multi-token string and treating the presence of each token as a feature.

Given the above dataset definition, getting a classifier is as simple as, e.g.:
<html>
<pre>
<font size=-1>
Learner learner = new LearnerLibsvm();
Classifier classifier = learner.learn(dataset);
</font>
</pre>
</html>
Classifiers are Serializable, so we can persist them for later use.
Aleph offers several ways of splitting a dataset, including random splits, cross-validation splits and splits for drawing a learning curve. The following example shows how to create 10 random splits, with 2/3 of the dataset used for training, and 1/3 for testing.

<html>
<pre>
<font size=-1>
Dataset dataset = ...   // define the dataset

Learner learner = new LearnerPerceptron();

Split s = new SplitNRandom(10, 66);

List<Dataset> splits = s.split(dataset);

for (Dataset split : splits) {
        System.out.println("split = " + split);
                
        Classifier classifier = learner.learn(split);

        Dataset predictions = classifier.classify(split);
        // do something with the predictions
}
</font>
</pre>
</html>
Aleph has several scorers built in, or you can provide your own. The following example shows how to score system predictions against the gold standard dataset, using the precision and recall measures typically using in text mining.

<html>
<pre>
<font size=-1>
Dataset dataset = ...   // define the dataset

Learner learner = new LearnerPerceptron();

List<Dataset> splits = new SplitOneRun().split(dataset);

for (Dataset split : splits) {
        System.out.println("split = " + split);
                
        Classifier classifier = learner.learn(split);

        Dataset predictions = classifier.classify(split);

        Scorer scorer = new ScorerPrecisionAndRecall();
        scorer.add(dataset, predictions);
        System.out.println("pre:" + scorer.getScore(Measure.PRECISION));
        System.out.println("rec:" + scorer.getScore(Measure.RECALL));
        System.out.println("f1:" + scorer.getScore(Measure.FMEASURE));                               

}
</font>
</pre>
</html>
[[How to create a simple classifier]]
[[How to split a dataset]]
[[How to use a scorer]]
The javadoc documentation for the latest version can be found [[here|javadoc/index.html]].
/***
|''Name:''|LegacyStrikeThroughPlugin|
|''Description:''|Support for legacy (pre 2.1) strike through formatting|
|''Version:''|1.0.2|
|''Date:''|Jul 21, 2006|
|''Source:''|http://www.tiddlywiki.com/#LegacyStrikeThroughPlugin|
|''Author:''|MartinBudden (mjbudden (at) gmail (dot) com)|
|''License:''|[[BSD open source license]]|
|''CoreVersion:''|2.1.0|
***/

//{{{
// Ensure that the LegacyStrikeThrough Plugin is only installed once.
if(!version.extensions.LegacyStrikeThroughPlugin) {
version.extensions.LegacyStrikeThroughPlugin = {installed:true};

config.formatters.push(
{
	name: "legacyStrikeByChar",
	match: "==",
	termRegExp: /(==)/mg,
	element: "strike",
	handler: config.formatterHelpers.createElementAndWikify
});

} //# end of "install only once"
//}}}
Unless otherwise noted, the following copyright statement applies:
© Copyright 2006, 2007, 2008, 2009 The University of Sheffield, UK

Aleph is distributed under the [[GNU Lesser General Public License (LGPL)|http://www.gnu.org/licenses/lgpl.html]] [>img[LPGL logo|http://www.gnu.org/graphics/lgplv3-88x31.png]]

Aleph is built on top of other java libraries which we gratefully acknowledge:
* [[fastutil|http://fastutil.dsi.unimi.it/]]
* [[matrix toolkits for java|http://ressim.berlios.de/]]
* [[libsvm|http://www.csie.ntu.edu.tw/~cjlin/libsvm/]]
[[Aleph]]
[[Getting Started]]
[[Download]]
[[Javadoc]]
[[HowTo's]]
[[License]]
[[Sourceforge.net|http://sourceforge.net/projects/aleph-ml]]
[[X-Media project|http://www.x-media-project.org/]]
<!--{{{-->

<div id='topMenu' refresh='content' tiddler='MainMenu'></div>
<div id='sidebar'>
<div id='sidebarOptions' refresh='content' tiddler='SideBarOptions'></div>
<div id='sidebarTabs' refresh='content' force='true' tiddler='SideBarTabs'></div>
</div>
<div id='displayArea'>
<div id='messageArea'></div>
<div id='tiddlerDisplay'></div>
</div>
<!--}}}-->
a multi-platform machine learning framework aimed at simplicity and performance.
Aleph
/***
|''Name:''|SparklinePlugin|
|''Description:''|Sparklines macro|
***/
//{{{
if(!version.extensions.SparklinePlugin) {
version.extensions.SparklinePlugin = {installed:true};

//--
//-- Sparklines
//--

config.macros.sparkline = {};
config.macros.sparkline.handler = function(place,macroName,params)
{
	var data = [];
	var min = 0;
	var max = 0;
	var v;
	for(var t=0; t<params.length; t++) {
		v = parseInt(params[t]);
		if(v < min)
			min = v;
		if(v > max)
			max = v;
		data.push(v);
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	box.title = data.join(",");
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	var h = box.offsetHeight;
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	box.style.position = "relative";
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		tick.style.left = d*2 + "px";
		tick.style.width = "2px";
		v = Math.floor(((data[d] - min)/(max-min)) * h);
		tick.style.top = (h-v) + "px";
		tick.style.height = v + "px";
		box.appendChild(tick);
	}
};


}
//}}}
/*{{{*/
/*Blackicity Theme for TiddlyWiki*/
/*Design and CSS by Saq Imtiaz*/
/*Version 1.0*/
/*}}}*/
/*{{{*/
body{	font-family: "Neue Helvetica", Helvetica, "Lucida Grande", Verdana, sans-serif;
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#topMenu {position:relative; background:#282826; padding:10px; color:#fff;font-family:'Lucida Grande', Verdana, Sans-Serif;}
#topMenu br {display:none;}

#topMenu a{			color: #999;
			padding: 0px 8px 0px 8px;
			border-right: 1px solid #444;}
#topMenu a:hover {color:#fff; background:transparent;}

#displayArea {margin-left:1em; margin-bottom:2em; margin-top:0.5em;}


a, a:hover{
color:#333;
text-decoration: none;   background:transparent; 
}

.viewer a, .viewer a:hover {border-bottom:1px dotted #333; font-weight:bold;}


.viewer .button, .editorFooter .button{
color: #333;
border: 1px solid #333;
}

.viewer .button:hover,
.editorFooter .button:hover, .viewer .button:active, .viewer .highlight,.editorFooter .button:active, .editorFooter .highlight{
color: #fff;
background: #333;
border-color: #333;
}

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.title {color:#222; border-bottom:1px solid#222; font-family:'Lucida Grande', Verdana, Sans-Serif; font-size:1.5em;}
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.shadow .title{color:#999;}

.toolbar {font-size:90%;}
.selected .toolbar a {color:#999999;}
.selected .toolbar a:hover {color:#333; background:transparent;border:1px solid #fff;}

.toolbar .button:hover, .toolbar .highlight, .toolbar .marked, .toolbar a.button:active{color:#333; background:transparent;border:1px solid #fff;}

/***
!Sidebar
***/
#sidebar { margin-bottom:2em !important; margin-bottom:1em; right:0;
}

/***
!SidebarOptions
***/
#sidebarOptions { padding-top:2em;background:#f3f3f3;padding-left:0.5em;}

#sidebarOptions a {
			color:#333;
                        background:#f3f3f3;
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			text-decoration: none;
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#sidebarOptions	a:hover, #sidebarOptions a:active {
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#sidebarOptions input {border:1px solid #ccc; }

#sidebarOptions .sliderPanel {
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#sidebarOptions .sliderPanel input {border:1px solid #999;}
#sidebarOptions .sliderPanel .txtOptionInput {border:1px solid #999;width:9em;}

#sidebarOptions .sliderPanel a {font-weight:normal; color:#555;background-color: #f3f3f3; border-bottom:1px dotted #333;}


#sidebarOptions .sliderPanel a:hover {
color:#111;
background-color: #f3f3f3;
border:none;
border-bottom:1px dotted #111;
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***/
 .listTitle {color:#222;}
#sidebarTabs {background:#f3f3f3;}

#sidebarTabs .tabContents {background:#cfcfcf;}

#sidebarTabs .tabUnselected:hover {color:#999;}

#sidebarTabs .tabSelected{background:#cfcfcf;}

#sidebarTabs .tabContents .tiddlyLink, #sidebarTabs .tabContents .button{color:#666;}
#sidebarTabs .tabContents .tiddlyLink:hover,#sidebarTabs .tabContents .button:hover{color:#222;background:transparent; text-decoration:none;border:none;}

#sidebarTabs .tabContents .button:hover, #sidebarTabs .tabContents .highlight, #sidebarTabs .tabContents .marked, #sidebarTabs .tabContents a.button:active{color:#222;background:transparent;}

#sidebarTabs .txtMoreTab .tabSelected,
#sidebarTabs .txtMoreTab .tab:hover,
#sidebarTabs .txtMoreTab .tabContents{
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 background: #f3f3f3; border:1px solid #f3f3f3;
}

#sidebarTabs .txtMoreTab .tabUnselected {
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 background: #AFAFAF;
}



/***
!Tabs
***/
.tabSelected{color:#fefefe; background:#999; padding-bottom:1px;}
 .tabSelected, .tabSelected:hover {
 color: #111;
 background: #fefefe;
 border: solid 1px #cfcfcf;
}

 .tabUnselected {
 color: #999;
 background: #eee;
 border: solid 1px #cfcfcf;
 padding-bottom:1px;
}
.tabUnselected:hover {text-decoration:none; border:1px solid #cfcfcf;}
.tabContents {background:#fefefe;}





.tagging, .tagged {
border: 1px solid #eee;
background-color: #F7F7F7;
}

.selected .tagging, .selected .tagged {
background-color: #f3f3f3;
border: 1px solid #ccc;
}

.tagging .listTitle, .tagged .listTitle {
color: #bbb;
}

.selected .tagging .listTitle, .selected .tagged .listTitle {
color: #333;
}

.tagging .button, .tagged .button {
color:#ccc;
}
.selected .tagging .button, .selected .tagged .button {
color:#aaa;
}

.highlight, .marked {background:transparent; color:#111; border:none; text-decoration:underline;}

.tagging .button:hover, .tagged .button:hover, .tagging .button:active, .tagged .button:active {
border: none; background:transparent; text-decoration:underline; color:#333;
}



.popup {
background: #cfcfcf;
border: 1px solid #333;
}

.popup li.disabled {
color: #000;
}

.popup li a, .popup li a:visited {
color: #555;
border: none;
}

.popup li a:hover {
background: #f3f3f3;
color: #555;
border: none;
}



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border: 4px dotted #282826;
background: #F3F3F3;
color: #333;
font-size:90%;
}

#messageArea a:hover { background:#f5f5f5; border:none;}


#messageArea .button{
color: #333;
border: 1px solid #282826;
}

#messageArea .button:hover {
color: #fff;
background: #282826;
border-color: #282826;
}






.tiddler {padding-bottom:10px;}

.viewer blockquote {
border-left: 5px solid #282826;
}

.viewer table, .viewer td {
border: 1px solid #282826;
}

.viewer th, thead td {
background: #282826;
border: 1px solid #282826;
color: #fff;
}
.viewer pre {
border: 1px solid #ccc;
background: #f5f5f5;
}

.viewer code {
color: #111; background:#f5f5f5;
}

.viewer hr {
border-top: dashed 1px #222; margin:0 1em;
}

.editor input {
border: 1px solid #ccc; margin-top:5px;
}

.editor textarea {
border: 1px solid #ccc;
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h1,h2,h3,h4,h5 { color: #282826; background: transparent; padding-bottom:2px; font-family: Arial, Helvetica, sans-serif; }
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h2 {font-size:16px;}
h3 {font-size: 14px;}
/*}}}*/